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  5. Als_g23877

Als_g23877


Description : not classified & original description: none


Gene families : OG0001451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g23877

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00207790 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G03830 No alias guanylate-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G46070 No alias Guanylate-binding family protein 0.04 OrthoFinder output from all 47 species
Ala_g09475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056605 No alias not classified & original description: CDS=339-3572 0.03 OrthoFinder output from all 47 species
Azfi_s4316.g118720 No alias not classified & original description: CDS=46-1086 0.02 OrthoFinder output from all 47 species
Ceric.03G061100.1 Ceric.03G061100 not classified & original description: pacid=50572331... 0.03 OrthoFinder output from all 47 species
Ceric.33G001500.1 Ceric.33G001500 not classified & original description: pacid=50606915... 0.04 OrthoFinder output from all 47 species
Dcu_g05791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021121001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01021122001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os02g20410.1 LOC_Os02g20410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g13643 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Mp5g01230.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g16107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003191 Guanylate-bd/ATL_C 304 613
IPR015894 Guanylate-bd_N 41 299
No external refs found!