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  5. Als_g23126

Als_g23126 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g23126
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Aop_g11414 COI1 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
MA_14836g0010 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Solyc02g079190.3.1 TIR1, Solyc02g079190 component TIR1/AFB of auxin receptor complex. component... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 68 114
IPR041567 COI1_F-box 10 48
No external refs found!