Als_g22914


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22914

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00035310 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.06 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42698.t1 Aspi01Gene42698 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42702.t1 Aspi01Gene42702 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55584.t1 Aspi01Gene55584 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55586.t1 Aspi01Gene55586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55587.t1 Aspi01Gene55587 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0185.g056668 No alias not classified & original description: CDS=100-1869 0.03 OrthoFinder output from all 47 species
GSVIVT01013268001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10343795g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g07580.2 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g02430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018244 No alias not classified & original description: CDS=306-11297 0.04 OrthoFinder output from all 47 species
Smo440026 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo444980 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc08g077490.2.1 Solyc08g077490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g17786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024722_P001 Zm00001e024722 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010482 Peroxin 2941 3069
IPR009291 Vps62 2041 2169
IPR009291 Vps62 4308 4423
IPR009291 Vps62 2269 2417
IPR031646 VPS13_extend_chorein 136 382
IPR026854 VPS13-like_N 2 114
IPR009543 VPS13_VAB 3343 3595
IPR031642 VPS13_mid_RBG 567 791
No external refs found!