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  5. Als_g22857

Als_g22857 (emb2746)


Aliases : emb2746

Description : exoribonuclease *(RNase J) & original description: none


Gene families : OG0003970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22857

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00241540 emb2746,... RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder output from all 47 species
Ala_g32457 emb2746 exoribonuclease *(RNase J) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11224 emb2746 exoribonuclease *(RNase J) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24290 emb2746 exoribonuclease *(RNase J) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G090000.1 emb2746, Ceric.02G090000 exoribonuclease *(RNase J) & original description:... 0.04 OrthoFinder output from all 47 species
Gb_29169 emb2746 exo-/endoribonuclease (RNase J) 0.04 OrthoFinder output from all 47 species
LOC_Os02g33610.1 emb2746, LOC_Os02g33610 exo-/endoribonuclease (RNase J) 0.02 OrthoFinder output from all 47 species
Len_g08129 emb2746 exoribonuclease *(RNase J) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20489 emb2746 exoribonuclease *(RNase J) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429859g0010 emb2746 exo-/endoribonuclease (RNase J) 0.04 OrthoFinder output from all 47 species
MA_10430099g0010 emb2746 no description available(sp|q84w56|rnj_arath : 150.0) 0.02 OrthoFinder output from all 47 species
MA_10437259g0030 emb2746 no description available(sp|q84w56|rnj_arath : 164.0) 0.03 OrthoFinder output from all 47 species
Mp3g10830.1 emb2746 exo-/endoribonuclease (RNase J) 0.02 OrthoFinder output from all 47 species
Ppi_g25090 emb2746 exoribonuclease *(RNase J) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g16311 No alias exoribonuclease *(RNase J) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18551 emb2746 exoribonuclease *(RNase J) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013900_P001 emb2746, Zm00001e013900 exo-/endoribonuclease (RNase J) 0.02 OrthoFinder output from all 47 species
Zm00001e025070_P003 emb2746, Zm00001e025070 exo-/endoribonuclease (RNase J) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR011108 RMMBL 459 515
IPR001279 Metallo-B-lactamas 134 271
IPR044822 Myb_DNA-bind_4 926 1013
No external refs found!