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  5. Als_g22771

Als_g22771 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22771
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00120860 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Aspi01Gene01667.t3 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02115.t1 ATPDR7, PDR7,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76765 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031314001 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os12g32820.1 ATPDR5, PDR5,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10348400g0010 PDR1, ATPDR1 ABC transporter G family member 29 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp4g06670.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Sam_g29979 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo99541 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Spa_g30595 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12264 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027849_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 103 154
IPR013525 ABC_2_trans 1202 1414
IPR013525 ABC_2_trans 515 727
IPR013581 PDR_assoc 739 797
IPR043926 ABCG_dom 1085 1145
IPR043926 ABCG_dom 394 472
IPR003439 ABC_transporter-like_ATP-bd 904 1056
IPR003439 ABC_transporter-like_ATP-bd 180 361
No external refs found!