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  5. Als_g22647

Als_g22647


Description : substrate adaptor of CUL3-BTB E3 ubiquitin ligase complex & original description: none


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22647

Target Alias Description ECC score Gene Family Method Actions
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Aop_g12703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12927 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Cba_g17052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G078000.1 Ceric.09G078000 not classified & original description: pacid=50587188... 0.03 OrthoFinder output from all 47 species
Dde_g02362 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Dde_g23638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
GSVIVT01024541001 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g22600.1 LOC_Os03g22600 BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
Msp_g07382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01164 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Pir_g19945 No alias substrate adaptor of CUL3-BTB E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g61327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g092560.3.1 Solyc02g092560 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g41434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 29 119
IPR027356 NPH3_dom 218 491
No external refs found!