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  5. Als_g22478

Als_g22478 (MBD10)


Aliases : MBD10

Description : methylation reader *(MBD10-11) & original description: none


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22478

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00169140 MBD11, ATMBD11,... Methyl-CpG-binding domain-containing protein 11... 0.02 OrthoFinder output from all 47 species
AMTR_s00149p00022460 MBD11, ATMBD11,... Methyl-CpG-binding domain-containing protein 11... 0.02 OrthoFinder output from all 47 species
Adi_g022931 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060317 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05923 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20078 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19391 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21478 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05790 MBD10 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63346.t1 Aspi01Gene63346 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37518 MBD10 methylation reader *(MBD10-11) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g02072 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07494 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13703 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18445 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03856 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28634 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004995_P005 MBD11, ATMBD11,... methylation reader (MBD10-11) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 1 60
No external refs found!