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  5. Als_g22424

Als_g22424


Description : not classified & original description: none


Gene families : OG0009715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009715_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22424

Target Alias Description ECC score Gene Family Method Actions
Adi_g082512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G050900.1 Ceric.15G050900 not classified & original description: pacid=50639644... 0.03 OrthoFinder output from all 47 species
Ceric.33G008800.1 Ceric.33G008800 not classified & original description: pacid=50606874... 0.04 OrthoFinder output from all 47 species
Len_g07771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 253 283
IPR002885 Pentatricopeptide_repeat 303 330
IPR002885 Pentatricopeptide_repeat 224 251
IPR002885 Pentatricopeptide_repeat 655 680
IPR002885 Pentatricopeptide_repeat 545 593
IPR002885 Pentatricopeptide_repeat 756 799
IPR002885 Pentatricopeptide_repeat 404 452
IPR002885 Pentatricopeptide_repeat 334 383
IPR002885 Pentatricopeptide_repeat 152 199
IPR002885 Pentatricopeptide_repeat 473 522
IPR002885 Pentatricopeptide_repeat 683 731
IPR002885 Pentatricopeptide_repeat 75 129
No external refs found!