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  5. Pnu_g12546

Pnu_g12546 (TT5, CFI, A11)


Aliases : TT5, CFI, A11

Description : EC_5.5 intramolecular lyase & original description: none


Gene families : OG0005178 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12546

Target Alias Description ECC score Gene Family Method Actions
Cba_g74298 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30922 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14254 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo151616 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.02 OrthoFinder output from all 47 species
Solyc05g010320.4.1 TT5, CFI, A11,... chalcone isomerase 0.03 OrthoFinder output from all 47 species
Spa_g12792 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011764_P001 TT5, CFI, A11,... chalcone isomerase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 8 205
No external refs found!