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  5. Als_g22366

Als_g22366


Description : E3 ubiquitin ligase *(PIRE) & original description: none


Gene families : OG0001463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001463_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22366

Target Alias Description ECC score Gene Family Method Actions
Ceric.05G068100.1 Ceric.05G068100 E3 ubiquitin ligase *(PIRE) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G029100.1 Ceric.10G029100 E3 ubiquitin ligase *(PIRE) & original description:... 0.03 OrthoFinder output from all 47 species
Cre01.g040500 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g10298 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g37030.1 LOC_Os02g37030 RING-C2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Lfl_g08933 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37903 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47359 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!