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  5. Als_g22361

Als_g22361


Description : not classified & original description: none


Gene families : OG0002037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22361

Target Alias Description ECC score Gene Family Method Actions
Adi_g021817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23770 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G082900.1 OTP82, Ceric.16G082900 not classified & original description: pacid=50589499... 0.04 OrthoFinder output from all 47 species
Ceric.22G033800.1 Ceric.22G033800 not classified & original description: pacid=50614443... 0.04 OrthoFinder output from all 47 species
Dac_g12255 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17663 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020757001 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.03 OrthoFinder output from all 47 species
Len_g16899 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45081 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23254 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00847 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04428 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 161 201
IPR032867 DYW_dom 237 329
No external refs found!