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  5. Als_g22270

Als_g22270


Description : regulatory protein *(CBP60) of systemic acquired resistance & original description: none


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00206980 evm_27.TU.AmTr_v1... Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00092720 evm_27.TU.AmTr_v1... Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G73805 No alias Calmodulin binding protein-like 0.03 OrthoFinder output from all 47 species
AT5G57580 No alias Calmodulin-binding protein 0.05 OrthoFinder output from all 47 species
AT5G62570 No alias Calmodulin binding protein-like 0.03 OrthoFinder output from all 47 species
Adi_g107973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08456 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ceric.31G029800.1 Ceric.31G029800 regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Dde_g02342 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ehy_g06068 No alias regulatory protein *(CBP60) of systemic acquired... 0.04 OrthoFinder output from all 47 species
GSVIVT01003207001 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01008322001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01008323001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01008324001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01029152001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g44600.1 LOC_Os11g44600 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36910.1 LOC_Os12g36910 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_23963g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g15745 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Sam_g30187 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Sam_g30188 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Sam_g51653 No alias regulatory protein *(CBP60) of systemic acquired... 0.04 OrthoFinder output from all 47 species
Smo166784 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g079040.3.1 Solyc02g079040 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g036390.2.1 Solyc12g036390 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e001388_P002 Zm00001e001388 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004278_P001 Zm00001e004278 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e008018_P001 Zm00001e008018 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e011726_P001 Zm00001e011726 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e014847_P002 Zm00001e014847 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e038367_P001 Zm00001e038367 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e039693_P002 Zm00001e039693 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR046831 Calmodulin_bind_N 87 234
IPR046830 Calmod_bind_M 247 312
IPR046829 Calmod_bind_C 319 376
No external refs found!