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  5. Pnu_g12525

Pnu_g12525 (GLP5)


Aliases : GLP5

Description : not classified & original description: none


Gene families : OG0000033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12525

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00155350 evm_27.TU.AmTr_v1... Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00137080 evm_27.TU.AmTr_v1... Germin-like protein 9-3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Aev_g36874 GLP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46096 GLP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11785 GLP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33340 GL22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g47252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000102001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031080001 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_18428 GLP5 Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_18733 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os08g09040.1 LOC_Os08g09040 Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os08g09060.1 LOC_Os08g09060 Germin-like protein 8-10 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10427432g0010 GLP5 Germin-like protein 8-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_579918g0010 GL22 Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_7898849g0010 GL22 Germin-like protein subfamily 2 member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g01480.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp2g01930.1 GLP10 Germin-like protein subfamily 2 member 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g00860.1 GLP5 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g34808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo109767 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo92738 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g088270.3.1 Solyc01g088270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g102400.3.1 GLP5, Solyc01g102400 Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc09g090040.3.1 Solyc09g090040 Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g29797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021635_P001 Zm00001e021635 Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e021639_P001 Zm00001e021639 Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 79 224
No external refs found!