Aliases : ATSYP52, SYP52
Description : Qc-type SYP5-group component of SNARE membrane fusion complex & original description: none
Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Als_g21833 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Len_g29175 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.03 | OrthoFinder output from all 47 species | |
MA_5571g0010 | ATSYP52, SYP52 | SYP5 group Qc-type SNARE protein | 0.02 | OrthoFinder output from all 47 species | |
Mp3g14430.1 | ATSYP52, SYP52 | SYP5 group Qc-type SNARE protein | 0.02 | OrthoFinder output from all 47 species | |
Ore_g30768 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g24653 | ATSYP52, SYP52 | Qc-type SYP5-group component of SNARE membrane fusion... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006817_P002 | ATSYP52, SYP52,... | SYP5 group Qc-type SNARE protein | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
MF | GO:0047952 | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000727 | T_SNARE_dom | 179 | 230 |
No external refs found! |