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  5. Als_g21633

Als_g21633 (SDG2, ATXR3)


Aliases : SDG2, ATXR3

Description : class-III histone methyltransferase *(Trx) & original description: none


Gene families : OG0002791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002791_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21633

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00149000 SDG2, ATXR3,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
AT4G15180 SDG2, ATXR3 SET domain protein 2 0.06 OrthoFinder output from all 47 species
Adi_g039581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14143 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Ala_g13000 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.09 OrthoFinder output from all 47 species
Aob_g28999 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Aop_g29882 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20150.t1 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene24078.t2 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Cba_g33105 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ceric.18G017200.1 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01030649001 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
LOC_Os08g08210.1 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.04 OrthoFinder output from all 47 species
Len_g14756 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g02478 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.08 OrthoFinder output from all 47 species
MA_102811g0010 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.07 OrthoFinder output from all 47 species
MA_102811g0020 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species
Mp2g06500.1 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.05 OrthoFinder output from all 47 species
Msp_g15475 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ore_g37849 SDG2, ATXR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41517 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Pir_g65975 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02428 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Sam_g17455 No alias class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Smo447947 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Solyc07g052940.4.1 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.07 OrthoFinder output from all 47 species
Spa_g50988 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Tin_g09792 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e021659_P001 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.06 OrthoFinder output from all 47 species
Zm00001e039942_P003 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1773 1895
IPR045606 SDG2_C 1907 2321
No external refs found!