1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g21421

Als_g21421


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21421

Target Alias Description ECC score Gene Family Method Actions
Adi_g019345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06674 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36240.t1 Aspi01Gene36240 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007864 No alias not classified & original description: CDS=1-924 0.04 OrthoFinder output from all 47 species
Cba_g16354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g37614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g65712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G003300.1 Ceric.08G003300 not classified & original description: pacid=50638706... 0.06 OrthoFinder output from all 47 species
Ceric.09G067900.1 Ceric.09G067900 not classified & original description: pacid=50588290... 0.04 OrthoFinder output from all 47 species
Ceric.12G065400.1 Ceric.12G065400 not classified & original description: pacid=50601520... 0.03 OrthoFinder output from all 47 species
Ceric.1Z218900.1 Ceric.1Z218900 not classified & original description: pacid=50637330... 0.05 OrthoFinder output from all 47 species
Dac_g08942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 151 200
IPR002885 Pentatricopeptide_repeat 362 409
IPR002885 Pentatricopeptide_repeat 290 339
IPR002885 Pentatricopeptide_repeat 221 270
IPR002885 Pentatricopeptide_repeat 465 512
IPR002885 Pentatricopeptide_repeat 427 459
IPR002885 Pentatricopeptide_repeat 69 128
No external refs found!