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  5. Als_g21149

Als_g21149


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21149

Target Alias Description ECC score Gene Family Method Actions
Adi_g012590 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08664 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g12875 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g16234 CRM3, HCF152 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48572.t1 CRM3, HCF152,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70102.t1 Aspi01Gene70102 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.03 OrthoFinder output from all 47 species
Ceric.23G078700.1 Ceric.23G078700 not classified & original description: pacid=50610433... 0.03 OrthoFinder output from all 47 species
Dac_g23808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06340 CRM3, HCF152 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g13290 EMB2279, EMB88 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08780 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14407 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g37245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 508 554
IPR002885 Pentatricopeptide_repeat 287 337
IPR002885 Pentatricopeptide_repeat 425 486
IPR002885 Pentatricopeptide_repeat 355 414
No external refs found!