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  5. Als_g20929

Als_g20929


Description : HYL1-interacting scaffold factor (CARP9) of miRNA biogenesis pathway & original description: none


Gene families : OG0002982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20929

Target Alias Description ECC score Gene Family Method Actions
AT3G21290 No alias dentin sialophosphoprotein-related 0.03 OrthoFinder output from all 47 species
Adi_g036263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117176 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.04 OrthoFinder output from all 47 species
Aob_g30277 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.06 OrthoFinder output from all 47 species
Aspi01Gene06052.t1 Aspi01Gene06052 HYL1-interacting scaffold factor (CARP9) of miRNA... 0.07 OrthoFinder output from all 47 species
Aspi01Gene06712.t1 Aspi01Gene06712 HYL1-interacting scaffold factor (CARP9) of miRNA... 0.04 OrthoFinder output from all 47 species
Ceric.05G022400.1 Ceric.05G022400 HYL1-interacting scaffold factor (CARP9) of miRNA... 0.06 OrthoFinder output from all 47 species
Dac_g09425 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.03 OrthoFinder output from all 47 species
Dcu_g02053 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.07 OrthoFinder output from all 47 species
Ehy_g30845 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01016889001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os03g08820.1 LOC_Os03g08820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g35901 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.04 OrthoFinder output from all 47 species
MA_113519g0010 CTF18 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g06020.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g16143 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021907 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.04 OrthoFinder output from all 47 species
Spa_g12857 No alias HYL1-interacting scaffold factor (CARP9) of miRNA... 0.03 OrthoFinder output from all 47 species
Zm00001e000644_P002 Zm00001e000644 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Zm00001e038842_P001 Zm00001e038842 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR010844 Occludin_ELL 1345 1442
No external refs found!