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  5. Pnu_g12389

Pnu_g12389 (ABF1)


Aliases : ABF1

Description : not classified & original description: none


Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12389
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT4G34000 DPBF5, ABF3 abscisic acid responsive elements-binding factor 3 0.04 OrthoFinder output from all 47 species
Gb_16168 ABF2, ATAREB1, AREB1 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Len_g18511 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g23600.1 ABF1 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Solyc04g078840.3.1 ABF2, ATAREB1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Solyc09g009490.4.1 ABI5, GIA1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e003794_P001 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e019163_P004 GBF4, Zm00001e019163 transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e022136_P001 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003919 FMN adenylyltransferase activity IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!