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Als_g20203


Description : component *(Sm-D2) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex & original description: none


Gene families : OG0003421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20203

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0045.g029762 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.04 OrthoFinder output from all 47 species
Azfi_s0108.g045256 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder output from all 47 species
Ceric.04G039600.1 Ceric.04G039600 component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021133.4 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 OrthoFinder output from all 47 species
Cre10.g453450 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder output from all 47 species
Gb_19475 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species
LOC_Os05g24970.1 LOC_Os05g24970 component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Mp3g10740.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species
Pp3c12_17690V3.1 Pp3c12_17690 Small nuclear ribonucleoprotein family protein 0.01 OrthoFinder output from all 47 species
Sam_g08212 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder output from all 47 species
Spa_g46484 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder output from all 47 species
Zm00001e007570_P002 Zm00001e007570 component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 29 103
No external refs found!