Gb_20939


Description : component Tic55 of inner envelope TIC translocation system


Gene families : OG_01_0006467 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006467_tree ,
OG_02_0008625 (LandPlants) Phylogenetic Tree(s): OG_02_0008625_tree ,
OG_03_0009070 (SeedPlants) Phylogenetic Tree(s): OG_03_0009070_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20939
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00118960 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.04 Archaeplastida
AT2G24820 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II 0.04 Archaeplastida
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.06 Archaeplastida
Mp8g17030.1 No alias component Tic55 of inner envelope TIC translocation system 0.03 Archaeplastida
Pp3c7_15550V3.1 No alias translocon at the inner envelope membrane of chloroplasts 55-II 0.03 Archaeplastida
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.04 Archaeplastida
Zm00001e016099_P001 No alias component Tic55 of inner envelope TIC translocation system 0.03 Archaeplastida
AMTR_s00019p00118960 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.02 LandPlants
AT2G24820 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II 0.03 LandPlants
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.05 LandPlants
Mp8g17030.1 No alias component Tic55 of inner envelope TIC translocation system 0.02 LandPlants
Pp3c7_15550V3.1 No alias translocon at the inner envelope membrane of chloroplasts 55-II 0.03 LandPlants
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.02 LandPlants
Zm00001e016099_P001 No alias component Tic55 of inner envelope TIC translocation system 0.03 LandPlants
AMTR_s00019p00118960 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.01 SeedPlants
AT2G24820 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II 0.03 SeedPlants
LOC_Os02g54980.1 No alias component Tic55 of inner envelope TIC translocation system 0.05 SeedPlants
Solyc12g096550.2.1 No alias component Tic55 of inner envelope TIC translocation system 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 95 177
IPR013626 PaO 300 384
No external refs found!