Als_g19389

Description : component *(eL20) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001533_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g19389
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
Ala_g37995	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g20873	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g31464	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 47 species
Aop_g54401	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cba_g09676	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.28G006400.1	Ceric.28G006400	component *(eL20) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000615.59	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre01.g047750	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Dac_g26638	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
GSVIVT01021433001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
LOC_Os01g47660.1	LOC_Os01g47660	component RPL18a of LSU proteome component	0.02	OrthoFinder output from all 47 species
LOC_Os01g54870.1	LOC_Os01g54870	component RPL18a of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os05g49030.1	LOC_Os05g49030	component RPL18a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Msp_g09599	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Msp_g23887	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g25812	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ppi_g27285	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g32152	No alias	component *(eL20) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Zm00001e026540_P001	Zm00001e026540	component RPL18a of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e032436_P001	Zm00001e032436	component RPL18a of LSU proteome component	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR023573	Ribosomal_L18a//L18Ae/LX	2	91

External Links

No external refs found!

Als_g19389

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation