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  5. AMTR_s00041p00082900

AMTR_s00041p00082900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.49

Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana


Gene families : OG_01_0000959 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000959_tree ,
OG_02_0000587 (LandPlants) Phylogenetic Tree(s): OG_02_0000587_tree ,
OG_03_0016769 (SeedPlants) Phylogenetic Tree(s): OG_03_0016769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00082900
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Gb_14149 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 Archaeplastida
Gb_21243 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 Archaeplastida
Gb_26190 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 Archaeplastida
Gb_38984 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
MA_8643g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
GSVIVT01022440001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 LandPlants
Gb_14149 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 LandPlants
Gb_21243 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 LandPlants
Gb_38984 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 LandPlants
LOC_Os10g08570.1 No alias no hits & (original description: none) 0.03 LandPlants
MA_10436637g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 LandPlants
MA_169053g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 LandPlants
MA_8643g0010 No alias no hits & (original description: none) 0.05 LandPlants
Solyc02g062290.2.1 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 LandPlants
LOC_Os10g08570.1 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 450 515
IPR000504 RRM_dom 353 413
IPR000504 RRM_dom 273 342
No external refs found!