Als_g19291


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g19291
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Adi_g014847 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018518 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30586 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008666 No alias not classified & original description: CDS=1-2997 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038899 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2004 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g07278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07445 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07653 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67756 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67893 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G025600.1 Ceric.10G025600 not classified & original description: pacid=50611862... 0.03 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g10603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11875 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22785 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33753 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02322 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23648 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24117 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51968 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17374 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13947 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05980 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g36692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14001 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19941 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02334 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013724 No alias not classified & original description: CDS=1-1671 0.03 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16921 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04035 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29152 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 681 708
IPR002885 Pentatricopeptide_repeat 53 78
IPR002885 Pentatricopeptide_repeat 519 542
IPR002885 Pentatricopeptide_repeat 719 743
IPR002885 Pentatricopeptide_repeat 428 475
IPR002885 Pentatricopeptide_repeat 80 126
IPR002885 Pentatricopeptide_repeat 312 357
IPR002885 Pentatricopeptide_repeat 545 589
IPR002885 Pentatricopeptide_repeat 195 243
No external refs found!