Pnu_g12208


Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00247620 STI,... Protein STICHEL OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00099080 evm_27.TU.AmTr_v1... Protein STICHEL-like 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g23650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18920.t1 Aspi01Gene18920 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g030014 No alias not classified & original description: CDS=316-3777 0.03 OrthoFinder output from all 47 species
Cba_g12073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14646 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10187700g0010 STI Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_34437g0010 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_34437g0020 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g32517 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08449 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61848 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g111680.3.1 Solyc03g111680 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g24966 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007784_P001 Zm00001e007784 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032180_P001 Zm00001e032180 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA

No InterPro domains available for this sequence

No external refs found!