Als_g18727


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18727
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Adi_g018518 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077328 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088267 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06708 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g20462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04431 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18763 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30420 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30578 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40125 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55255 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55307 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31319 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.04 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.04 OrthoFinder output from all 47 species
Cba_g05819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05975 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07445 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19892 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29369 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g30003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67235 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67449 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67864 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75387 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75393 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G045700.1 Ceric.08G045700 not classified & original description: pacid=50638513... 0.05 OrthoFinder output from all 47 species
Ceric.09G038200.1 DOT4, Ceric.09G038200 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.36G034200.1 Ceric.36G034200 not classified & original description: pacid=50568019... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dac_g17090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22449 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25475 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18166 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63884 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007662 CRR22 not classified & original description: CDS=517-2514 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022404 No alias not classified & original description: CDS=1-1632 0.04 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 248 276
IPR002885 Pentatricopeptide_repeat 1 40
IPR002885 Pentatricopeptide_repeat 111 157
No external refs found!