Gb_20779


Description : component RNPS1 of RNA quality control Exon Junction complex


Gene families : OG_01_0003818 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003818_tree ,
OG_02_0002920 (LandPlants) Phylogenetic Tree(s): OG_02_0002920_tree ,
OG_03_0004355 (SeedPlants) Phylogenetic Tree(s): OG_03_0004355_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20779
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00150630 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.03 Archaeplastida
Cre03.g164950 No alias RNA processing.RNA quality control Exon Junction complex... 0.02 Archaeplastida
Solyc10g005590.4.1 No alias component RNPS1 of RNA quality control Exon Junction complex 0.07 Archaeplastida
Zm00001e028289_P001 No alias component RNPS1 of RNA quality control Exon Junction complex 0.03 Archaeplastida
AMTR_s00071p00150630 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 LandPlants
Solyc10g005590.4.1 No alias component RNPS1 of RNA quality control Exon Junction complex 0.04 LandPlants
AMTR_s00071p00150630 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 SeedPlants
Solyc10g005590.4.1 No alias component RNPS1 of RNA quality control Exon Junction complex 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 98 165
No external refs found!