Als_g18401


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18401

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00110050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.03 OrthoFinder output from all 47 species
Aev_g07367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17031 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66850.t1 Aspi01Gene66850 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000557 OTP86 not classified & original description: CDS=1-2739 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024956 No alias not classified & original description: CDS=109-3012 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037007 No alias not classified & original description: CDS=105-2705 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046079 No alias not classified & original description: CDS=202-2550 0.03 OrthoFinder output from all 47 species
Cba_g11847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G059700.1 CRR22, Ceric.23G059700 not classified & original description: pacid=50609689... 0.03 OrthoFinder output from all 47 species
Dac_g25047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05677 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06366 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08263 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21350 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35843 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35844 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43169 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05389 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01000719001 OSB1 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.03 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
GSVIVT01011333001 SLO1 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01012461001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
Gb_25283 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Len_g04349 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12189 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21053 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25337 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63597 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32073 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53939 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54829 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56081 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009730 No alias not classified & original description: CDS=1-2454 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017928 No alias not classified & original description: CDS=112-2919 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022672 No alias not classified & original description: CDS=1-3558 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026000 No alias not classified & original description: CDS=66-1799 0.03 OrthoFinder output from all 47 species
Sam_g07051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.03 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 203 250
No external refs found!