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  5. Als_g18257

Als_g18257 (AT-GT2, GT2)


Aliases : AT-GT2, GT2

Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18257
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09047 No alias Trihelix-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g72625 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Gb_31300 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Gb_38519 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Len_g19264 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_331768g0010 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Ore_g08779 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36845 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59710 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65125 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g60919 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006964 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 519 607
IPR044822 Myb_DNA-bind_4 204 289
No external refs found!