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  5. Als_g18252

Als_g18252 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0012126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012126_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18252

Target Alias Description ECC score Gene Family Method Actions
Aop_g05737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G042900.1 Ceric.38G042900 not classified & original description: pacid=50580589... 0.04 OrthoFinder output from all 47 species
Dac_g16376 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19025 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 703 727
IPR002885 Pentatricopeptide_repeat 526 574
IPR002885 Pentatricopeptide_repeat 325 373
IPR002885 Pentatricopeptide_repeat 225 271
IPR002885 Pentatricopeptide_repeat 628 676
IPR002885 Pentatricopeptide_repeat 426 472
IPR002885 Pentatricopeptide_repeat 124 169
IPR046848 E_motif 747 787
No external refs found!