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  5. Als_g18058

Als_g18058 (MYB3R-3, AtMYB3R3)


Aliases : MYB3R-3, AtMYB3R3

Description : R1R2R3-MYB transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18058

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00137930 MYB54, ATMYB54,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.02 OrthoFinder output from all 47 species
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.02 OrthoFinder output from all 47 species
Aev_g01523 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.05 OrthoFinder output from all 47 species
Aob_g18554 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene54281.t2 AtMYB109,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre01.g034350 PGA37, ATMYB118, MYB118 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Cre03.g197100 ATMYB119, MYB119 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dde_g12855 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g17909 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019834001 ATMYB3R5, MYB3R-5 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os03g51110.1 BW52, ATMYB52,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Lfl_g28242 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.05 OrthoFinder output from all 47 species
Lfl_g29787 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.06 OrthoFinder output from all 47 species
Nbi_g05843 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Pir_g65999 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g06389 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000153 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021926 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g24569 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.05 OrthoFinder output from all 47 species
Zm00001e004128_P003 AtMYB117, LOF1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e018391_P001 MYB54, ATMYB54,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 50 96
IPR001005 SANT/Myb 102 148
IPR001005 SANT/Myb 154 197
No external refs found!