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  5. Als_g17986

Als_g17986 (WCRKC2)


Aliases : WCRKC2

Description : plastidial thioredoxin *(TrxL2) & original description: none


Gene families : OG0003501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g17986
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Adi_g074477 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09350 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene09674.t1 WCRKC1, Aspi01Gene09674 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78057 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
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    4. Sequence
    5. Als_g63158

    Als_g63158

    Ceric.14G067600.1 WCRKC2, Ceric.14G067600 plastidial thioredoxin *(TrxL2) & original description:... 0.03 OrthoFinder output from all 47 species
    Dac_g16962 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.04 OrthoFinder output from all 47 species
    Dcu_g13155 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.05 OrthoFinder output from all 47 species
    Dde_g12646 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.04 OrthoFinder output from all 47 species
    GSVIVT01033478001 WCRKC2 Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
    Len_g00345 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
    Len_g17068 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
    Lfl_g05918 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.04 OrthoFinder output from all 47 species
    Mp5g20740.1 WCRKC2 Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
    Msp_g07535 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
    Sacu_v1.1_s0175.g024567 WCRKC2 plastidial thioredoxin *(TrxL2) & original description:... 0.04 OrthoFinder output from all 47 species
    Solyc10g078920.3.1 WCRKC1, Solyc10g078920 Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
    Spa_g03171 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
    Tin_g27254 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
    Zm00001e023777_P001 WCRKC2, Zm00001e023777 Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
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    Type GO Term Name Evidence Source
    MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
    MF GO:0005215 transporter activity IEP HCCA
    BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
    BP GO:0006788 heme oxidation IEP HCCA
    BP GO:0006810 transport IEP HCCA
    MF GO:0016491 oxidoreductase activity IEP HCCA
    MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
    MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
    MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
    MF GO:0019843 rRNA binding IEP HCCA
    MF GO:0022857 transmembrane transporter activity IEP HCCA
    BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
    BP GO:0042168 heme metabolic process IEP HCCA
    BP GO:0042440 pigment metabolic process IEP HCCA
    BP GO:0051179 localization IEP HCCA
    BP GO:0051234 establishment of localization IEP HCCA
    MF GO:0051287 NAD binding IEP HCCA
    BP GO:0055085 transmembrane transport IEP HCCA
    CC GO:0110165 cellular anatomical entity IEP HCCA
    InterPro domains Description Start Stop
    IPR013766 Thioredoxin_domain 96 189
    No external refs found!