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  5. Als_g17809

Als_g17809


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g17809
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT1G76590 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g059752 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086526 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11841 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20133 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13585 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46664 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57143 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013455001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
Gb_33451 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50120.1 LOC_Os04g50120 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
LOC_Os06g41930.2 LOC_Os06g41930 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
LOC_Os10g42410.3 LOC_Os10g42410 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Msp_g01480 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06957 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13349 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53768 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007100_P003 Zm00001e007100 transcription factor (PLATZ) 0.05 OrthoFinder output from all 47 species
Zm00001e013748_P001 Zm00001e013748 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 73 144
No external refs found!