1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g17445

Als_g17445


Description : 5,10-methenyl-THF synthetase & original description: none


Gene families : OG0003580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003580_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g17445
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT1G76730 No alias NagB/RpiA/CoA transferase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g054516 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06033 No alias 5,10-methenyl-THF synthetase & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g05916 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04280 No alias 5,10-methenyl-THF synthetase & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene57962.t1 Aspi01Gene57962 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G024200.1 Ceric.27G024200 5,10-methenyl-THF synthetase & original description:... 0.04 OrthoFinder output from all 47 species
Cre13.g587450 No alias Coenzyme metabolism.tetrahydrofolate... 0.02 OrthoFinder output from all 47 species
Dcu_g12998 No alias 5,10-methenyl-THF synthetase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g52013 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21086 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g07020.1 LOC_Os12g07020 5,10-methenyl-THF synthetase 0.02 OrthoFinder output from all 47 species
Len_g05341 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01289 No alias 5,10-methenyl-THF synthetase & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g48305 No alias 5,10-methenyl-THF synthetase & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g09827 No alias 5,10-methenyl-THF synthetase & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g35372 No alias 5,10-methenyl-THF synthetase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06813 No alias 5,10-methenyl-THF synthetase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g30533 No alias 5,10-methenyl-THF synthetase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g48624 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g071700.3.1 Solyc04g071700 5,10-methenyl-THF synthetase 0.05 OrthoFinder output from all 47 species
Spa_g04511 No alias 5,10-methenyl-THF synthetase & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g31772 No alias 5,10-methenyl-THF synthetase & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e039459_P001 Zm00001e039459 5,10-methenyl-THF synthetase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 396 464
IPR002698 FTHF_cligase 120 318
No external refs found!