Als_g16495 (HY3, OOP1, PHYB)

Aliases : HY3, OOP1, PHYB

Description : temperature sensor protein *(PHY-B) & original description: none

Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g16495

Target	Alias	Description	ECC score	Gene Family Method
Adi_g013003	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g23525	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33149	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g16813	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene59146.t1	HY3, OOP1, PHYB,...	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0234.g059451	FHY2, HY8, PHYA, FRE1	phytochrome photoreceptor *(PHY) & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g12773	FHY2, HY8, PHYA, FRE1	phytochrome photoreceptor *(PHY) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08852	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g14074	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g19479	FHY2, HY8, PHYA, FRE1	phytochrome photoreceptor *(PHY) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g35990	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07013	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012090	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016463	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021936	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original...	0.03	OrthoFinder output from all 47 species
Sam_g24706	No alias	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g045480.3.1	PHYC, Solyc07g045480	phytochrome photoreceptor (PHY)	0.03	OrthoFinder output from all 47 species
Spa_g14459	FHY2, HY8, PHYA, FRE1	phytochrome photoreceptor *(PHY) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g20479	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013515	Phytochrome_cen-reg	430	603
IPR003018	GAF	236	417
IPR013654	PAS_2	85	202
IPR013767	PAS_fold	766	888
IPR013767	PAS_fold	635	750
IPR003661	HisK_dim/P	914	972
IPR003594	HATPase_C	1022	1134

External Links

No external refs found!

Als_g16495 (HY3, OOP1, PHYB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation