Als_g16472 (BTAF1, RGD3, CHA16,...)

Aliases : BTAF1, RGD3, CHA16, ATBTAF1, CHR16

Description : TATA box-binding protein-associated factor *(MOT1) & original description: none

Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g16472

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00236000	BTAF1, RGD3,...	No description available	0.02	OrthoFinder output from all 47 species
AT3G54280	BTAF1, RGD3,...	DNA binding;ATP binding;nucleic acid...	0.06	OrthoFinder output from all 47 species
Adi_g086270	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Aev_g04198	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.02	OrthoFinder output from all 47 species
Ala_g12502	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Aob_g12460	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Aop_g70865	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Ceric.27G041200.1	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.02	OrthoFinder output from all 47 species
Dcu_g03219	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.09	OrthoFinder output from all 47 species
Ehy_g09279	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01019359001	BTAF1, RGD3,...	RNA biosynthesis.RNA polymerase II-dependent...	0.1	OrthoFinder output from all 47 species
Gb_19667	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.03	OrthoFinder output from all 47 species
LOC_Os02g06588.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.02	OrthoFinder output from all 47 species
LOC_Os02g06592.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.02	OrthoFinder output from all 47 species
Lfl_g35777	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.07	OrthoFinder output from all 47 species
MA_10430482g0010	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.03	OrthoFinder output from all 47 species
MA_10431148g0010	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.05	OrthoFinder output from all 47 species
MA_79681g0010	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.06	OrthoFinder output from all 47 species
Mp6g18490.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.01	OrthoFinder output from all 47 species
Pir_g09833	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.05	OrthoFinder output from all 47 species
Pnu_g13829	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.02	OrthoFinder output from all 47 species
Sam_g29302	No alias	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
Smo186944	BTAF1, RGD3,...	RNA biosynthesis.RNA polymerase II-dependent...	0.04	OrthoFinder output from all 47 species
Solyc08g074500.2.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.03	OrthoFinder output from all 47 species
Solyc08g074520.2.1	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.02	OrthoFinder output from all 47 species
Spa_g08445	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.07	OrthoFinder output from all 47 species
Tin_g13188	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005680	anaphase-promoting complex	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	1479	1776
IPR001650	Helicase_C	1836	1939
IPR022707	Mot1_central_dom	789	1242

External Links

No external refs found!

Als_g16472 (BTAF1, RGD3, CHA16,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation