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  5. Als_g16081

Als_g16081 (LHW)


Aliases : LHW

Description : LHW/LHL-type transcription factor & original description: none


Gene families : OG0001070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16081
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00042170 LHW,... Transcription factor LHW OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g082190 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0096.g043743 LHW LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G004600.1 Ceric.19G004600 LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028300001 EMB1444 Transcription factor EMB1444 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Pir_g40326 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27140 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32089 EMB1444 LHW/LHL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g066280.4.1 EMB1444, Solyc09g066280 Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e009089_P003 LHW, Zm00001e009089 Transcription factor LHW OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024625_P002 LHW, Zm00001e024625 Transcription factor LHW OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 5 177
No external refs found!