1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g16079

Als_g16079 (PEN3, ABCG36, ATPDR8,...)


Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16079
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Ala_g25214 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30586 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20762.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20765.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19030 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017204001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_34309 ATPDR3, PDR3 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Gb_34310 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os09g16330.2 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10436632g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_135152g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Nbi_g01506 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e037233_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 79 168
IPR003439 ABC_transporter-like_ATP-bd 922 1074
IPR013581 PDR_assoc 745 809
IPR003439 ABC_transporter-like_ATP-bd 193 375
IPR013525 ABC_2_trans 530 740
IPR013525 ABC_2_trans 1220 1432
IPR043926 ABCG_dom 1103 1162
IPR043926 ABCG_dom 408 462
No external refs found!