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  5. Als_g16026

Als_g16026 (ATHDA19, HDA1, HD1,...)


Aliases : ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none


Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16026

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00130970 ATHDA19, HDA1,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.44 ATHDA19, HDA1,... Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
LOC_Os08g25570.1 HDA6, RTS1,... class-I histone deacetylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 35 324
No external refs found!