Als_g16007 (ATCNGC9, CNGC9)

Aliases : ATCNGC9, CNGC9

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g16007

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021348.58	No alias	Putative cyclic nucleotide-gated ion channel 8...	0.01	OrthoFinder output from all 47 species
GSVIVT01011487001	DND1, ATCNGC2, CNGC2	External stimuli response.temperature.temperature...	0.02	OrthoFinder output from all 47 species
Gb_10882	No alias	Probable cyclic nucleotide-gated ion channel 20,...	0.02	OrthoFinder output from all 47 species
LOC_Os02g53340.2	ATCNGC20,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
LOC_Os06g33600.1	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
LOC_Os12g06570.1	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
LOC_Os12g28260.1	CNGC7, ATCNGC7,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Smo113786	ATCNGC9, CNGC9	Solute transport.channels.VIC superfamily.cyclic...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	89	406

External Links

No external refs found!