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  5. Als_g16002

Als_g16002


Description : cation exchanger *(NCL/EF-CAX) & original description: none


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16002

Target Alias Description ECC score Gene Family Method Actions
AT1G29025 No alias Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species
Adi_g015835 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15229 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g49126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014240001 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
GSVIVT01021164001 No alias Solute transport.carrier-mediated transport.CDF... 0.02 OrthoFinder output from all 47 species
Lfl_g16288 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
MA_104140g0010 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Mp5g15310.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Mp8g02310.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Ppi_g59906 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33354 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49587 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52188 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 331 391
IPR004837 NaCa_Exmemb 446 589
IPR004837 NaCa_Exmemb 98 265
No external refs found!