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  5. Als_g15972

Als_g15972


Description : not classified & original description: none


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15972
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00083270 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00178p00038720 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G46110 No alias Domain of unknown function (DUF966) 0.05 OrthoFinder output from all 47 species
AT5G59790 No alias Domain of unknown function (DUF966) 0.02 OrthoFinder output from all 47 species
Adi_g041418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106265 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07432 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g46581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22133 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene08984.t1 Aspi01Gene08984 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34495.t1 Aspi01Gene34495 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58852.t1 Aspi01Gene58852 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010179 No alias not classified & original description: CDS=245-2059 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046319 No alias not classified & original description: CDS=53-2212 0.03 OrthoFinder output from all 47 species
Ceric.01G003700.1 Ceric.01G003700 not classified & original description: pacid=50590972... 0.05 OrthoFinder output from all 47 species
Ceric.13G026100.1 Ceric.13G026100 not classified & original description: pacid=50635606... 0.06 OrthoFinder output from all 47 species
Ceric.14G059700.1 Ceric.14G059700 not classified & original description: pacid=50633215... 0.03 OrthoFinder output from all 47 species
Ceric.23G080300.1 Ceric.23G080300 not classified & original description: pacid=50610288... 0.02 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016603001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os01g62200.1 LOC_Os01g62200 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g48600.1 LOC_Os03g48600 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g39750.1 LOC_Os09g39750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g21271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g13130.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g14472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04028 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010278 No alias not classified & original description: CDS=116-3175 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024671 No alias not classified & original description: CDS=409-2136 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025363 No alias not classified & original description: CDS=123-2075 0.04 OrthoFinder output from all 47 species
Sam_g50494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g054800.3.1 Solyc04g054800 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g075690.3.1 Solyc06g075690 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g09824 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000820_P002 Zm00001e000820 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e003892_P002 Zm00001e003892 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e019641_P005 Zm00001e019641 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027133_P001 Zm00001e027133 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028781_P001 Zm00001e028781 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 19 110
No external refs found!