Als_g15922


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15922

Target Alias Description ECC score Gene Family Method Actions
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g008293 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101343 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05438 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36105 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38081 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05713 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06359 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15766 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030454 No alias not classified & original description: CDS=2-2074 0.04 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07175 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g20030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G024400.1 Ceric.16G024400 not classified & original description: pacid=50589838... 0.05 OrthoFinder output from all 47 species
Ceric.22G009800.1 Ceric.22G009800 not classified & original description: pacid=50615356... 0.06 OrthoFinder output from all 47 species
Dde_g02801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25197 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33479 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g33493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04437 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g23050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23950 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26081 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46091 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20608 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39469 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35307 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03152 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48708 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015139 No alias not classified & original description: CDS=1-852 0.07 OrthoFinder output from all 47 species
Sam_g17711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Spa_g02061 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17205 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21372 VAC1, ECB2, ATECB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g26788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g32996 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g45601 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31074 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 588 610
IPR002885 Pentatricopeptide_repeat 456 478
IPR002885 Pentatricopeptide_repeat 482 528
IPR002885 Pentatricopeptide_repeat 178 226
IPR002885 Pentatricopeptide_repeat 279 327
IPR002885 Pentatricopeptide_repeat 380 428
No external refs found!