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  5. Als_g15919

Als_g15919 (ATCNGC20, CNGC20, CNBT1)


Aliases : ATCNGC20, CNGC20, CNBT1

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15919

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene20300.t1 ATCNGC20,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44382.t1 ATCNGC20,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36527 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ehy_g02907 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ehy_g05039 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Gb_10882 No alias Probable cyclic nucleotide-gated ion channel 20,... 0.03 OrthoFinder output from all 47 species
MA_10437228g0010 CNGC19, ATCNGC19 Putative cyclic nucleotide-gated ion channel 19... 0.03 OrthoFinder output from all 47 species
Pp3c26_570V3.1 CNGC15,... cyclic nucleotide-gated channel 16 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 116 442
No external refs found!