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  5. Als_g15896

Als_g15896


Description : component *(IES2) of INO80 chromatin remodeling complex & original description: none


Gene families : OG0002110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15896

Target Alias Description ECC score Gene Family Method Actions
AT2G47350 No alias HIT zinc finger ;PAPA-1-like conserved region 0.03 OrthoFinder output from all 47 species
Adi_g014880 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Adi_g056260 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.04 OrthoFinder output from all 47 species
Adi_g093987 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Aob_g40727 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Ehy_g05991 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Ehy_g23608 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.04 OrthoFinder output from all 47 species
Len_g22125 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Len_g28163 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Lfl_g06684 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Lfl_g07056 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
MA_29452g0010 No alias component IES2 of INO80 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Ppi_g09777 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.05 OrthoFinder output from all 47 species
Sam_g16822 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Sam_g26861 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Solyc01g079350.3.1 Solyc01g079350 component IES2 of INO80 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Spa_g52345 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Zm00001e011794_P001 Zm00001e011794 component IES2 of INO80 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031011 Ino80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006880 INO80B_C 684 768
IPR007529 Znf_HIT 785 815
No external refs found!