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  5. Als_g15844

Als_g15844


Description : putative silicon efflux transporter *(LSI2) & original description: none


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15844
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Aop_g04633 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene25042.t1 Aspi01Gene25042 putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Cba_g32803 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Cba_g38733 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G017100.1 Ceric.13G017100 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G017300.1 Ceric.13G017300 putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01035710001 No alias Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
LOC_Os02g57620.1 LOC_Os02g57620 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
LOC_Os10g39980.1 LOC_Os10g39980 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Ppi_g13706 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Spa_g11340 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e023569_P001 Zm00001e023569 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 24 511
No external refs found!