AMTR_s00041p00031550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.15

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor


Gene families : OG_01_0001057 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001057_tree ,
OG_02_0002382 (LandPlants) Phylogenetic Tree(s): OG_02_0002382_tree ,
OG_03_0002235 (SeedPlants) Phylogenetic Tree(s): OG_03_0002235_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00031550
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.08 Archaeplastida
AT3G43300 ATMIN7, BEN1 HOPM interactor 7 0.08 Archaeplastida
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.07 Archaeplastida
AT4G35380 No alias SEC7-like guanine nucleotide exchange family protein 0.03 Archaeplastida
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.06 Archaeplastida
Cpa|evm.model.tig00000852.23 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Cre09.g390319 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01014993001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
GSVIVT01023854001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.09 Archaeplastida
GSVIVT01027623001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.09 Archaeplastida
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 Archaeplastida
Gb_07642 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
Gb_26513 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.1 Archaeplastida
LOC_Os03g14260.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
LOC_Os06g41780.2 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.01 Archaeplastida
LOC_Os07g37750.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
MA_20138g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 Archaeplastida
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 Archaeplastida
Mp7g11590.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 Archaeplastida
Pp3c11_12270V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.03 Archaeplastida
Pp3c18_8290V3.1 No alias HOPM interactor 7 0.06 Archaeplastida
Pp3c21_12020V3.1 No alias HOPM interactor 7 0.02 Archaeplastida
Pp3c7_14180V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.05 Archaeplastida
Smo173646 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 Archaeplastida
Smo85621 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Solyc01g091460.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 Archaeplastida
Solyc01g112350.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
Solyc12g017830.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 Archaeplastida
Zm00001e001058_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
Zm00001e010568_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 Archaeplastida
Zm00001e035267_P004 No alias No annotation 0.07 Archaeplastida
Zm00001e037574_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 Archaeplastida
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.07 LandPlants
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.06 LandPlants
AT4G35380 No alias SEC7-like guanine nucleotide exchange family protein 0.03 LandPlants
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.06 LandPlants
GSVIVT01023854001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 LandPlants
GSVIVT01027623001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 LandPlants
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 LandPlants
Gb_26513 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 LandPlants
LOC_Os03g14260.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 LandPlants
LOC_Os06g41780.2 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.01 LandPlants
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 LandPlants
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 LandPlants
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 LandPlants
Pp3c11_12270V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.03 LandPlants
Pp3c7_14180V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.05 LandPlants
Smo173646 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 LandPlants
Solyc01g091460.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 LandPlants
Solyc01g112350.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 LandPlants
Zm00001e001058_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 LandPlants
Zm00001e037574_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 LandPlants
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.07 SeedPlants
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.05 SeedPlants
AT4G35380 No alias SEC7-like guanine nucleotide exchange family protein 0.03 SeedPlants
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.05 SeedPlants
GSVIVT01023854001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 SeedPlants
GSVIVT01027623001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 SeedPlants
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 SeedPlants
Gb_26513 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 SeedPlants
LOC_Os03g14260.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 SeedPlants
LOC_Os06g41780.2 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.01 SeedPlants
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 SeedPlants
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 SeedPlants
Solyc01g091460.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 SeedPlants
Solyc01g112350.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 SeedPlants
Zm00001e001058_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 SeedPlants
Zm00001e037574_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 SeedPlants

Type GO Term Name Evidence Source
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015403 Sec7_C 1153 1238
IPR000904 Sec7_dom 606 789
No external refs found!