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  5. Pnu_g11884

Pnu_g11884


Description : xylulose-1,5-bisphosphate phosphatase *(CbbY) & original description: none


Gene families : OG0006895 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11884
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00176170 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
AT3G48420 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g011721 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.04 OrthoFinder output from all 47 species
Adi_g011722 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.02 OrthoFinder output from all 47 species
Ala_g03984 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.03 OrthoFinder output from all 47 species
Als_g08473 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.03 OrthoFinder output from all 47 species
Aob_g14222 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.04 OrthoFinder output from all 47 species
Aop_g13490 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.04 OrthoFinder output from all 47 species
Cba_g23538 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.04 OrthoFinder output from all 47 species
Ceric.26G047300.1 Ceric.26G047300 xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.07 OrthoFinder output from all 47 species
Cre03.g206550 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Dac_g15898 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g20846 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.03 OrthoFinder output from all 47 species
Dde_g22771 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g04450 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01007572001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Len_g07639 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.03 OrthoFinder output from all 47 species
MA_15334g0010 No alias xylulose-1,5-bisphosphate phosphatase (CbbY) 0.02 OrthoFinder output from all 47 species
Mp2g15630.1 No alias xylulose-1,5-bisphosphate phosphatase (CbbY) 0.02 OrthoFinder output from all 47 species
Msp_g08285 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g11508 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13435 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003132 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.04 OrthoFinder output from all 47 species
Sam_g36821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo437487 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Solyc03g111610.3.1 Solyc03g111610 xylulose-1,5-bisphosphate phosphatase (CbbY) 0.03 OrthoFinder output from all 47 species
Tin_g03820 No alias xylulose-1,5-bisphosphate phosphatase *(CbbY) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041492 HAD_2 72 268
No external refs found!