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  5. Als_g15749

Als_g15749 (RHA3A)


Aliases : RHA3A

Description : not classified & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15749
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 ATL6,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00221710 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00124480 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00152p00054630 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G53010 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G72200 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G35910 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42350 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G00305 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G09100 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G05280 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G06490 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G42200 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.02 OrthoFinder output from all 47 species
Als_g03725 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g11008 BRH1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene37200.t1 Aspi01Gene37200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46827.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65294.t1 Aspi01Gene65294 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene65865.t1 Aspi01Gene65865 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21909 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.01G098400.1 Ceric.01G098400 not classified & original description: pacid=50591772... 0.02 OrthoFinder output from all 47 species
Ceric.02G105300.1 ATL8, Ceric.02G105300 not classified & original description: pacid=50585310... 0.02 OrthoFinder output from all 47 species
Ceric.03G012300.1 BRH1, Ceric.03G012300 not classified & original description: pacid=50572071... 0.03 OrthoFinder output from all 47 species
Ceric.05G063000.1 Ceric.05G063000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.06G045100.1 Ceric.06G045100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.06G080900.1 Ceric.06G080900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.10G008300.1 Ceric.10G008300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.10G020700.1 RHA2A, Ceric.10G020700 not classified & original description: pacid=50612578... 0.03 OrthoFinder output from all 47 species
Ceric.11G079100.1 Ceric.11G079100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.17G012000.1 Ceric.17G012000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.18G057400.1 RHA3A, Ceric.18G057400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.25G065700.1 Ceric.25G065700 not classified & original description: pacid=50593844... 0.03 OrthoFinder output from all 47 species
Ceric.34G017800.1 Ceric.34G017800 not classified & original description: pacid=50623173... 0.03 OrthoFinder output from all 47 species
Ceric.36G022800.1 Ceric.36G022800 not classified & original description: pacid=50568753... 0.03 OrthoFinder output from all 47 species
Ceric.36G023100.1 Ceric.36G023100 not classified & original description: pacid=50568780... 0.04 OrthoFinder output from all 47 species
Dcu_g40181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02621 BRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00708 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g05299 BRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25748 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g26130 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g27581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012018001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01012019001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_04301 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_05385 No alias RHA2 signal transducer of abscisic acid perception 0.02 OrthoFinder output from all 47 species
Gb_28932 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g11460.1 ATL43, LOC_Os01g11460 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g11480.1 LOC_Os01g11480 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g11490.1 LOC_Os01g11490 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g16120.1 RHA2A, LOC_Os01g16120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g55110.1 LOC_Os01g55110 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os02g45780.1 LOC_Os02g45780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g46600.1 LOC_Os02g46600 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g57410.1 LOC_Os03g57410 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g16970.1 LOC_Os04g16970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g48310.1 LOC_Os04g48310 RING-H2 finger protein ATL48 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g49160.1 LOC_Os04g49160 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g15170.1 ATL63, TL63,... RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os05g29150.1 ATL8, LOC_Os05g29150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os06g11450.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g16060.1 LOC_Os06g16060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g34530.1 ATL43, LOC_Os06g34530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34560.1 ATL43, LOC_Os06g34560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34620.1 LOC_Os06g34620 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os10g42390.1 LOC_Os10g42390 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os12g02210.1 LOC_Os12g02210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g42530.1 RHA3B, LOC_Os12g42530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g21636 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g29571 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10385 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_101154g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_152783g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_189618g0010 ATL8 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_41514g0010 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_51630g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_786911g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp6g19130.1 ATL1F no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g42863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g14103 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g14690 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g32541 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g41833 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g30102 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g55293 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g09527 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g43947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003753 RHA3B not classified & original description: CDS=1-771 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017298 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018006 XERICO not classified & original description: CDS=1-537 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025158 No alias not classified & original description: CDS=1-642 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025249 No alias not classified & original description: CDS=1-534 0.02 OrthoFinder output from all 47 species
Sam_g06931 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc01g091770.4.1 Solyc01g091770 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc01g095810.3.1 Solyc01g095810 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc02g083660.1.1 Solyc02g083660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g005490.4.1 Solyc03g005490 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc03g083460.3.1 Solyc03g083460 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g008080.3.1 Solyc10g008080 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g081790.1.1 Solyc10g081790 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc11g005320.1.1 Solyc11g005320 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc12g094385.1.1 Solyc12g094385 E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g11356 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09893 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g20442 ATL2, TL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34059 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g36820 ATL8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e007103_P001 Zm00001e007103 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e007129_P001 Zm00001e007129 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015495_P001 Zm00001e015495 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016092_P001 Zm00001e016092 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e016470_P001 Zm00001e016470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019779_P001 Zm00001e019779 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e031439_P001 Zm00001e031439 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e031442_P001 Zm00001e031442 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e038107_P001 Zm00001e038107 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 164 207
No external refs found!