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  5. Als_g15689

Als_g15689 (LUT2)


Aliases : LUT2

Description : not classified & original description: none


Gene families : OG0006884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006884_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15689
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Cba_g01169 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05327 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g05820.1 LUT2 lycopene epsilon cyclase (LCY-e) 0.02 OrthoFinder output from all 47 species
Nbi_g08673 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03904 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19829 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.03 OrthoFinder output from all 47 species
Smo101391 LUT2 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
Tin_g22549 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027776_P002 LUT2, Zm00001e027776 lycopene epsilon cyclase (LCY-e) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!